Variants
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rs117639561

  • Conflicting interpretations of pathogenicity

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Description

This sequence change replaces valine, which is neutral and non-polar, with methionine, which is neutral and non-polar, at codon 814 of the SULF1 protein (p.Val814Met). This variant is present in population databases (rs117639561, gnomAD 0.07%), and has an allele count higher than expected for a pathogenic variant. This variant has not been reported in the literature in individuals affected with SULF1-related conditions. ClinVar contains an entry for this variant (Variation ID: 195575). Algorithms developed to predict the effect of missense changes on protein structure and function are either unavailable or do not agree on the potential impact of this missense change (SIFT: "Deleterious"; PolyPhen-2: "Probably Damaging"; Align-GVGD: "Class C0"). In summary, the available evidence is currently insufficient to determine the role of this variant in disease. Therefore, it has been classified as a Variant of Uncertain Significance.

Reference Allele

G


Alternative Allele

A

C

Chromosome

8


Location

69638747


Variant Type

SNP

Genes

ClinVar

Name

NM_001128205.2(SULF1):c.2440G>A (p.Val814Met)


Allele

A


Clinical Significance

Conflicting interpretations of pathogenicity

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