Variants
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rs1596473289

  • Uncertain significance

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Description

The PKD1 p.Glu4128Lys variant was not identified in the literature nor was it identified in the dbSNP, ClinVar, LOVD 3.0, ADPKD Mutation Database, PKD1-LOVD, the Exome Aggregation Consortium (August 8th 2016) or the Genome Aggregation Database (Feb 27, 2017). The p.Glu4128 residue is conserved across mammals and other organisms and 4 of 5 computational analyses (PolyPhen-2, SIFT, AlignGVGD, BLOSUM, MutationTaster) suggest that the Lys variant may impact the protein; however, this information is not predictive enough to assume pathogenicity. The variant occurs outside of the splicing consensus sequence and in silico or computational prediction software programs (SpliceSiteFinder, MaxEntScan, NNSPLICE, GeneSplicer) do not predict a difference in splicing. In summary, based on the above information, the clinical significance of this variant cannot be determined with certainty at this time. This variant is classified as a variant of uncertain significance.

Reference Allele

C


Alternative Allele

G

T

Chromosome

16


Location

2090347


Variant Type

SNP

Genes

ClinVar

Name

NM_001009944.3(PKD1):c.12382G>A (p.Glu4128Lys)


Allele

T


Clinical Significance

Uncertain significance

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