Variants
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rs201141648

  • Uncertain significance

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Description

This sequence change affects codon 1143 of the TRPM1 mRNA. It is a 'silent' change, meaning that it does not change the encoded amino acid sequence of the TRPM1 protein. It affects a nucleotide within the consensus splice site. This variant is present in population databases (rs201141648, gnomAD 0.2%). This variant has not been reported in the literature in individuals affected with TRPM1-related conditions. ClinVar contains an entry for this variant (Variation ID: 939300). Variants that disrupt the consensus splice site are a relatively common cause of aberrant splicing (PMID: 17576681, 9536098). Algorithms developed to predict the effect of sequence changes on RNA splicing suggest that this variant is not likely to affect RNA splicing. In summary, the available evidence is currently insufficient to determine the role of this variant in disease. Therefore, it has been classified as a Variant of Uncertain Significance.

Reference Allele

C


Alternative Allele

T

Chromosome

15


Location

31026916


Variant Type

SNP

Genes

Phenotypes

ClinVar

Name

NM_001252024.2(TRPM1):c.3495G>A (p.Leu1165=)


Allele

T


Clinical Significance

Uncertain significance

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