Variants
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rs368901614

  • Uncertain significance

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Description

This sequence change replaces arginine, which is basic and polar, with glutamine, which is neutral and polar, at codon 1260 of the TRPM1 protein (p.Arg1260Gln). This variant is present in population databases (rs368901614, gnomAD 0.01%). This variant has not been reported in the literature in individuals affected with TRPM1-related conditions. ClinVar contains an entry for this variant (Variation ID: 933751). Algorithms developed to predict the effect of missense changes on protein structure and function are either unavailable or do not agree on the potential impact of this missense change (SIFT: "Deleterious"; PolyPhen-2: "Probably Damaging"; Align-GVGD: "Class C0"). Algorithms developed to predict the effect of sequence changes on RNA splicing suggest that this variant may create or strengthen a splice site. In summary, the available evidence is currently insufficient to determine the role of this variant in disease. Therefore, it has been classified as a Variant of Uncertain Significance.

Reference Allele

C


Alternative Allele

T

Chromosome

15


Location

31002855


Variant Type

SNP

Genes

Phenotypes

ClinVar

Name

NM_001252024.2(TRPM1):c.3845G>A (p.Arg1282Gln)


Allele

T


Clinical Significance

Uncertain significance

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