Variants
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rs372890690

  • Conflicting interpretations of pathogenicity

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Description

This sequence change replaces arginine with glutamine at codon 577 of the FGD4 protein (p.Arg577Gln). The arginine residue is highly conserved and there is a small physicochemical difference between arginine and glutamine. This variant is not present in population databases (ExAC no frequency). This missense change has been observed in individual(s) with Charcot-Marie-Tooth disease (PMID: 26957070). Algorithms developed to predict the effect of missense changes on protein structure and function are either unavailable or do not agree on the potential impact of this missense change (SIFT: "Tolerated"; PolyPhen-2: "Probably Damaging"; Align-GVGD: "Class C0"). In summary, the available evidence is currently insufficient to determine the role of this variant in disease. Therefore, it has been classified as a Variant of Uncertain Significance.

Reference Allele

G


Alternative Allele

A

Chromosome

12


Location

32625748


Variant Type

SNP

Genes

ClinVar

Name

NM_001370298.3(FGD4):c.2141G>A (p.Arg714Gln)


Allele

A


Clinical Significance

Conflicting interpretations of pathogenicity

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