Variants
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rs756885149

  • Uncertain significance

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Description

This sequence change replaces glutamic acid with lysine at codon 398 of the FGD4 protein (p.Glu398Lys). The glutamic acid residue is highly conserved and there is a small physicochemical difference between glutamic acid and lysine. This variant is present in population databases (rs756885149, ExAC 0.006%). This variant has not been reported in the literature in individuals affected with FGD4-related conditions. Algorithms developed to predict the effect of missense changes on protein structure and function (SIFT, PolyPhen-2, Align-GVGD) all suggest that this variant is likely to be disruptive. Algorithms developed to predict the effect of sequence changes on RNA splicing suggest that this variant may disrupt the consensus splice site. In summary, the available evidence is currently insufficient to determine the role of this variant in disease. Therefore, it has been classified as a Variant of Uncertain Significance.

Reference Allele

G


Alternative Allele

A

Chromosome

12


Location

32611137


Variant Type

SNP

Genes

ClinVar

Name

NM_001370298.3(FGD4):c.1603G>A (p.Glu535Lys)


Allele

A


Clinical Significance

Uncertain significance

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