Variants
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rs762381137

  • Conflicting interpretations of pathogenicity

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Description

p.Ile270Thr (ATT>ACT): c.809 T>C in exon 8 of the CASQ2 gene (NM_001232.3)The Ile270Thr missense change has not been published as a disease-causing mutation or as a benign polymorphism to our knowledge. Ile270Thr results in a non-conservative amino acid substitution of a neutral non-polar Isoleucine with a neutral, polar Threonine at a position that is highly conserved throughout evolution. The NHLBI ESP Exome Variant Server reports Ile270Thr was not observed in approximately 5000 samples from individuals of European and African American backgrounds, indicating it is not a common benign variant in these populations. In addition, in silico analysis predicts Ile270Thr to be possibly damaging to protein structure/function. Other homozygous missense mutations in the CASQ2 gene have been reported in association with CPVT. Heterozygous carriers for one CASQ2 mutation are generally asymptomatic, however, mildly affected heterozygotes have been reported (Postma et al., 2002).Therefore, with the clinical and molecular information available at this time, we cannot unequivocally determine the clinical significance of the Ile270Thr variant in the CASQ2 gene. Ile270Thr is a strong candidate for a disease-causing mutation. The variant is found in CPVT panel(s).

Reference Allele

A


Alternative Allele

G

T

Chromosome

1


Location

115717869


Variant Type

SNP

Genes

ClinVar

Name

NM_001232.4(CASQ2):c.809T>C (p.Ile270Thr)


Allele

G


Clinical Significance

Conflicting interpretations of pathogenicity

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