Variants
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rs876657635

  • Likely pathogenic

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Description

The c.940-1G>T variant in CASQ2 has not been previously reported in individuals with CPVT and was absent from large population studies. This variant occurs in t he invariant region (+/- 1,2) of the splice consensus sequence and is predicted to cause altered splicing leading to an abnormal or absent protein. Homozygous o r compound heterozygous variants in CASQ2 are strongly associated with CPVT and splice variants as well as loss-of-function variants are part of the pathogenic variant spectrum (Roux-Buisson 2011). In summary, although additional studies ar e required to fully establish its clinical significance, the c.940-1G>T variant is likely pathogenic for CPVT in an autosomal recessive manner.

Reference Allele

C


Alternative Allele

A

Chromosome

1


Location

115702996


Variant Type

SNP

Genes

ClinVar

Name

NM_001232.4(CASQ2):c.940-1G>T


Allele

A


Clinical Significance

Likely pathogenic

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