Variants
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rs373258312

  • Uncertain significance

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Description

This sequence change replaces alanine with proline at codon 491 of the SAMD11 protein (p.Ala491Pro). The alanine residue is weakly conserved and there is a small physicochemical difference between alanine and proline. The frequency data for this variant in the population databases is considered unreliable, as metrics indicate poor data quality at this position in the ExAC database. This variant has not been reported in the literature in individuals affected with SAMD11-related conditions. Algorithms developed to predict the effect of missense changes on protein structure and function output the following: SIFT: "Tolerated"; PolyPhen-2: "Benign"; Align-GVGD: "Class C0". The proline amino acid residue is found in multiple mammalian species, which suggests that this missense change does not adversely affect protein function. In summary, the available evidence is currently insufficient to determine the role of this variant in disease. Therefore, it has been classified as a Variant of Uncertain Significance.

Reference Allele

G


Alternative Allele

C

Chromosome

1


Location

942965


Variant Type

SNP

Genes

Phenotypes

ClinVar

Name

NM_001385641.1(SAMD11):c.1960G>C (p.Ala654Pro)


Allele

C


Clinical Significance

Uncertain significance

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